A B C D E F G H I L M N O P Q R S T X Y

A

add - Variable in class org.mrd.repast.util.ArrayWidget

addActionListener(ActionListener) - Method in class org.mrd.repast.util.ArrayWidget

addColumn() - Method in class org.mrd.repast.util.ArrayWidget

addListener(ModelEventListener) - Method in class org.mrd.event.ModelEventSource

agentGrid - Variable in class org.mrd.repast.landscape.Landscape

Grid that holds the Agents.

agents - Variable in class org.mrd.repast.landscape.Landscape

A list of all the agents.

ALIVE - Static variable in class org.mrd.repast.landscape.LandscapeAgent

Constant representing an alive LandscapeAgent in the model.

ArrayPropertyDescriptor - class org.mrd.repast.util.ArrayPropertyDescriptor.

ArrayPropertyDescriptor(String, Object) - Constructor for class org.mrd.repast.util.ArrayPropertyDescriptor

Creates a new instance of TablePropertyDescriptor

ArrayPropertyDescriptor(String, Object, TableCellEditor) - Constructor for class org.mrd.repast.util.ArrayPropertyDescriptor

Creates a new instance of TablePropertyDescriptor

ArrayWidget - class org.mrd.repast.util.ArrayWidget.

ArrayWidget.ArrayTableModel - class org.mrd.repast.util.ArrayWidget.ArrayTableModel.

ArrayWidget.ArrayTableModel(Object) - Constructor for class org.mrd.repast.util.ArrayWidget.ArrayTableModel

ArrayWidget(Object) - Constructor for class org.mrd.repast.util.ArrayWidget

Creates a new instance of PropertyTable

B

Bernoulli - class org.mrd.random.Bernoulli.

Constructs a Bernoulli Trial with the given successProbability, using a cern.jet.random.engine.MersenneTwister seeded with the given seed.

Bernoulli(double, int) - Constructor for class org.mrd.random.Bernoulli

Constructs a Bernoulli Trial with the given successProbability, using a cern.jet.random.engine.MersenneTwister seeded with the given seed.

Bernoulli(double, RandomElement) - Constructor for class org.mrd.random.Bernoulli

Constructs a Bernoulli Trial with the given successProbability, using a given Random Generator.

birthAgents() - Method in class org.mrd.repast.landscape.Landscape

This will update the landscape by adding the new agents to the Grid and the agent list.

birthQueue - Variable in class org.mrd.repast.landscape.Landscape

This queue holds new agents that need to be added to the simulation at the end of the iteration.

C

chop(String) - Static method in class org.mrd.repast.util.StringUtils

Utility method for parsing a string into a double[]

contains(boolean[], boolean) - Static method in class org.mrd.repast.util.MoreArrays

contains(char[], char) - Static method in class org.mrd.repast.util.MoreArrays

contains(double[], double) - Static method in class org.mrd.repast.util.MoreArrays

contains(int[], int) - Static method in class org.mrd.repast.util.MoreArrays

contains(Object[], Object) - Static method in class org.mrd.repast.util.MoreArrays

copy(Object, int, Object, int, int) - Static method in class org.mrd.repast.util.MoreArrays

count - Variable in class org.mrd.analysis.RunningBasicStatistics

D

DEAD - Static variable in class org.mrd.repast.landscape.LandscapeAgent

Constant representing a dead LandscapeAgent in the landscape.

draw(SimGraphics) - Method in class org.mrd.repast.landscape.LandscapeAgent

Abstract draw() method must be overridden in Agents that extend this class

E

exitSim() - Method in class org.mrd.repast.control.ThinController

Exits a simulation.

F

field - Static variable in class org.mrd.repast.util.ObjectEditor

fireModelEvent(EventObject) - Method in class org.mrd.event.ModelEventSource

fireModelEvent(EventObject) - Method in interface org.mrd.event.ModelEventListener

G

getAgentAt(int, int) - Method in class org.mrd.repast.landscape.Landscape

getAgentGrid() - Method in class org.mrd.repast.landscape.Landscape

Getter for property agentGrid.

getAgents() - Method in class org.mrd.repast.landscape.Landscape

Getter for property agents.

getAlpha() - Method in class org.mrd.random.LimitedGamma

Getter for property alpha.

getAlpha() - Method in class org.mrd.random.LimitedBeta

Getter for property alpha.

getBeta() - Method in class org.mrd.random.LimitedBeta

Getter for property beta.

getCellEditorValue() - Method in class org.mrd.repast.util.ObjectEditor

getColumnClass(int) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

getColumnCount() - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

getColumnName(int) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

getCurrentAverage() - Method in class org.mrd.analysis.RunningBasicStatistics

getCurrentStd() - Method in class org.mrd.analysis.RunningBasicStatistics

getCurrentVariance() - Method in class org.mrd.analysis.RunningBasicStatistics

getData() - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

Getter for property data.

getHabitatGrid() - Method in class org.mrd.repast.landscape.Landscape

Getter for property habitatGrid.

getLambda() - Method in class org.mrd.random.LimitedGamma

Getter for property beta.

getMean() - Method in class org.mrd.random.LimitedGamma

Getter for property mean.

getMean() - Method in class org.mrd.random.LimitedBeta

Getter for property mean.

getModel() - Method in class org.mrd.repast.util.ArrayWidget

Getter for property model.

getNewInstance(String) - Method in class org.mrd.repast.util.ObjectEditor

getParameters() - Method in class org.mrd.repast.util.PropertiesFileReader

getPool() - Method in class org.mrd.repast.landscape.Landscape

Getter for property pool.

getPropertyName() - Method in class org.mrd.repast.util.ArrayWidget

getResourceAt(int, int) - Method in class org.mrd.repast.landscape.Landscape

This gets the Resource Object available at a (x, y) coordinate

getResourceValueAt(int, int) - Method in class org.mrd.repast.landscape.Landscape

This gets the Resource double value available at a (x, y) coordinate

getRowCount() - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

getRunCount() - Method in class org.mrd.repast.control.ThinController

getSizeX() - Method in class org.mrd.repast.landscape.Landscape

Getter for property sizeX.

getSizeY() - Method in class org.mrd.repast.landscape.Landscape

Getter for property sizeY.

getStage() - Method in class org.mrd.repast.landscape.LandscapeAgent

Getter for property stage.

getStd() - Method in class org.mrd.random.LimitedGamma

Getter for property std.

getStd() - Method in class org.mrd.random.LimitedBeta

Getter for property std.

getSuccessProbability() - Method in class org.mrd.random.Bernoulli

getTable() - Method in class org.mrd.repast.util.ArrayWidget

Getter for property table.

getValue() - Method in class org.mrd.repast.util.ArrayWidget

getValueAt(int, int) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

getVariance() - Method in class org.mrd.random.LimitedGamma

Getter for property variance.

getVariance() - Method in class org.mrd.random.LimitedBeta

Getter for property variance.

getWidget() - Method in class org.mrd.repast.util.ArrayPropertyDescriptor

getX() - Method in class org.mrd.repast.landscape.LandscapeAgent

Getter for property x.

getY() - Method in class org.mrd.repast.landscape.LandscapeAgent

Getter for property y.

H

habitatGrid - Variable in class org.mrd.repast.landscape.Landscape

Grid that holds the Habitat Resources

I

incriment(double) - Method in class org.mrd.analysis.RunningBasicStatistics

initSim() - Method in class org.mrd.repast.control.ThinController

insertionSort(double[]) - Static method in class org.mrd.repast.util.MoreArrays

interpolationSearch(double[], double) - Static method in class org.mrd.repast.util.MoreArrays

isBatch() - Method in class org.mrd.repast.control.ThinController

Getter for property batch.

isCellEditable(int, int) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

isEditable() - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

Getter for property editable.

isEmpty(boolean[]) - Static method in class org.mrd.repast.util.MoreArrays

isEmpty(char[]) - Static method in class org.mrd.repast.util.MoreArrays

isEmpty(double[]) - Static method in class org.mrd.repast.util.MoreArrays

isEmpty(int[]) - Static method in class org.mrd.repast.util.MoreArrays

isEmpty(Object[]) - Static method in class org.mrd.repast.util.MoreArrays

isGUI() - Method in class org.mrd.repast.control.ThinController

Getter for property gUI.

L

landscape - Variable in class org.mrd.repast.landscape.LandscapeAgent

Holds value of property landscape.

Landscape - class org.mrd.repast.landscape.Landscape.

Landscape Encapsulates much of the Internal Datastructure management of a spatial simulation.

Landscape(String) - Constructor for class org.mrd.repast.landscape.Landscape

Creates a new Landscape

LandscapeAgent - class org.mrd.repast.landscape.LandscapeAgent.

Used to supply "standard" methods to Agents that use the Landscape object.

LandscapeAgent(Landscape) - Constructor for class org.mrd.repast.landscape.LandscapeAgent

LimitedBeta - class org.mrd.random.LimitedBeta.

LimitedBeta(double, double, RandomElement) - Constructor for class org.mrd.random.LimitedBeta

Creates a new instance of Beta

LimitedBeta(double, double, RandomElement, boolean, boolean) - Constructor for class org.mrd.random.LimitedBeta

Creates a new instance of Beta

LimitedGamma - class org.mrd.random.LimitedGamma.

LimitedGamma(double, double, RandomElement) - Constructor for class org.mrd.random.LimitedGamma

Creates a new instance of Gamma

LimitedGamma(double, double, RandomElement, boolean, boolean) - Constructor for class org.mrd.random.LimitedGamma

Creates a new instance of Gamma

linearSearch(double[], double) - Static method in class org.mrd.repast.util.MoreArrays

listeners - Variable in class org.mrd.event.ModelEventSource

log - Variable in class org.mrd.repast.control.ThinController

log - Variable in class org.mrd.repast.landscape.Landscape

M

main(String[]) - Static method in class org.mrd.analysis.RunningBasicStatistics

main(String[]) - Static method in class org.mrd.random.Test

merge(double[], double[]) - Static method in class org.mrd.repast.util.MoreArrays

mergeSort(double[]) - Static method in class org.mrd.repast.util.MoreArrays

mergeSort(double[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

model - Variable in class org.mrd.repast.util.ArrayWidget

ModelEventListener - interface org.mrd.event.ModelEventListener.

ModelEventSource - class org.mrd.event.ModelEventSource.

ModelEventSource() - Constructor for class org.mrd.event.ModelEventSource

Creates a new instance of EventSource

MoreArrays - class org.mrd.repast.util.MoreArrays.

moveAgentTo(int, int, int, int) - Method in class org.mrd.repast.landscape.Landscape

moveAgentTo(LandscapeAgent, int, int) - Method in class org.mrd.repast.landscape.Landscape

mush(double[]) - Static method in class org.mrd.repast.util.StringUtils

Utility method for displaying a double[] as a string

N

nextBoolean() - Method in class org.mrd.random.Bernoulli

Returns a uniformly distributed random boolean.

nextDouble() - Method in class org.mrd.random.Bernoulli

nextInt() - Method in class org.mrd.random.Bernoulli

O

ObjectEditor - class org.mrd.repast.util.ObjectEditor.

ObjectEditor() - Constructor for class org.mrd.repast.util.ObjectEditor

onTickCountUpdate() - Method in class org.mrd.repast.control.ThinController

org.mrd.analysis - package org.mrd.analysis

org.mrd.event - package org.mrd.event

org.mrd.random - package org.mrd.random

org.mrd.repast.control - package org.mrd.repast.control

org.mrd.repast.landscape - package org.mrd.repast.landscape

org.mrd.repast.util - package org.mrd.repast.util

P

partition(double[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

PropertiesFileReader - class org.mrd.repast.util.PropertiesFileReader.

PropertiesFileReader(String) - Constructor for class org.mrd.repast.util.PropertiesFileReader

propertyName - Variable in class org.mrd.repast.util.ArrayWidget

putAgentAt(int, int, LandscapeAgent) - Method in class org.mrd.repast.landscape.Landscape

Q

quickSort(double[]) - Static method in class org.mrd.repast.util.MoreArrays

quickSort(double[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

R

reapAgents() - Method in class org.mrd.repast.landscape.Landscape

This will update the landscape by removing the dead agents from the Grid and the agent list.

remove - Variable in class org.mrd.repast.util.ArrayWidget

removeColumn() - Method in class org.mrd.repast.util.ArrayWidget

requestFocus() - Method in class org.mrd.repast.util.ArrayWidget

RunningBasicStatistics - class org.mrd.analysis.RunningBasicStatistics.

For each iteration of the model scan the list of agents, and determine the following number of agents/number survived.

RunningBasicStatistics() - Constructor for class org.mrd.analysis.RunningBasicStatistics

Creates a new instance of RunningBasicStatisticsTag

S

setBatch(boolean) - Method in class org.mrd.repast.control.ThinController

Setter for property batch.

setData(Object) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

Setter for property data.

setEditable(boolean) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

Setter for property editable.

setEnabled(boolean) - Method in class org.mrd.repast.util.ArrayWidget

setGUI(boolean) - Method in class org.mrd.repast.control.ThinController

Setter for property gUI.

setPool(ObjectPool) - Method in class org.mrd.repast.landscape.Landscape

Setter for property pool.

setPropertyName(String) - Method in class org.mrd.repast.util.ArrayWidget

setStage(int) - Method in class org.mrd.repast.landscape.LandscapeAgent

Setter for property stage.

setSuccessProbability(double) - Method in class org.mrd.random.Bernoulli

Returns a Bernoulli with the propability of success equal to successProbability.

setValue(Object) - Method in class org.mrd.repast.util.ArrayWidget

setValueAt(Object, int, int) - Method in class org.mrd.repast.util.ArrayWidget.ArrayTableModel

setX(int) - Method in class org.mrd.repast.landscape.LandscapeAgent

Setter for property x.

setY(int) - Method in class org.mrd.repast.landscape.LandscapeAgent

Setter for property y.

simEventPerformed(SimEvent) - Method in class org.mrd.repast.control.ThinController

Listens for SimEvents and responds accordingly.

stage - Variable in class org.mrd.repast.landscape.LandscapeAgent

Holds value of property stage.

startSim() - Method in class org.mrd.repast.control.ThinController

step() - Method in class org.mrd.repast.landscape.LandscapeAgent

Abstract step() method must be overridden in Agents that extend this class

StringUtils - class org.mrd.repast.util.StringUtils.

StringUtils() - Constructor for class org.mrd.repast.util.StringUtils

successProbability - Variable in class org.mrd.random.Bernoulli

sum - Variable in class org.mrd.analysis.RunningBasicStatistics

sumsq - Variable in class org.mrd.analysis.RunningBasicStatistics

swap(boolean[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

swap(char[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

swap(double[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

swap(int[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

swap(Object[], int, int) - Static method in class org.mrd.repast.util.MoreArrays

T

table - Variable in class org.mrd.repast.util.ArrayWidget

Test - class org.mrd.random.Test.

Test() - Constructor for class org.mrd.random.Test

Creates a new instance of Test

ThinController - class org.mrd.repast.control.ThinController.

ThinController() - Constructor for class org.mrd.repast.control.ThinController

ThinController(boolean) - Constructor for class org.mrd.repast.control.ThinController

Creates a ThinController, specifying whether this is a graphical controller or not.

toString(boolean[]) - Static method in class org.mrd.repast.util.MoreArrays

toString(char[]) - Static method in class org.mrd.repast.util.MoreArrays

toString(double[]) - Static method in class org.mrd.repast.util.MoreArrays

toString(int[]) - Static method in class org.mrd.repast.util.MoreArrays

toString(Object[]) - Static method in class org.mrd.repast.util.MoreArrays

X

x - Variable in class org.mrd.repast.landscape.LandscapeAgent

Holds value of property x (the agents location).

Y

y - Variable in class org.mrd.repast.landscape.LandscapeAgent

Holds value of property y (the agents location).

A B C D E F G H I L M N O P Q R S T X Y